Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX469586: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320289' containing sample 'DAR2075'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4M spots, 802M bases, 370.2Mb downloads

UUID: fef0b2b3-300e-4877-b5e6-cf5653097861

Design: Illumina sequencing of Staphylococcus aureus DAR2075 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA USA100

PRJNA228365 • SRP037668 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus DAR2075

SAMN02403827 • SRS556831 • All experiments • All runs

Organism: Staphylococcus aureus DAR2075

Library:

Name: Pond-320289

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 475200.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5DHK6

material_type: DNA:DNA Somatic

product_order: PDO-2554

product_part_number: P-MCV-0001

project: G54927

research_project: RP-506

root_sample_id: SM-4P9EP

sample_id: SM-5DHK6

work_request: 40067

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4M spots, 802M bases, 370.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1167852	1,937,207	391.3M	180.4Mb	2014-02-11
SRR1172548	2,033,205	410.7M	189.8Mb	2014-02-19

ID:: 649774

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